inout.cc File Reference

Functions for input and output operations. More...

#include "globals.hh"
#include <fstream>
#include <iostream>
#include <string.h>
#include "allocation.hh"
#include "geometry.hh"

Go to the source code of this file.

Functions
void	readParameters (string filename, string &outputFilename, string &VTKInputFilename, string &GnuplotSkeletonFilename, string &GnuplotAltSkeletonFilename, string &descriptorsFilename, string &parametersFilename)
int ***	allocateFromVTK (string filename, int ***amat, bool report)
	Allocates the matrix from dimensions read from VTK file. More...
void	importFromVTK (string filename, int ***amat, bool report)
	Reads morphology from VTK file. Changes amat. More...
void	saveToVTK (const char *filename, int ***amat, bool report)
	Saves morphology to VTK file. More...
void	saveToDX (const char *filename, int ***amat, bool report)
	Saves morphology to DX file. More...
void	saveToGnuplot (string filename, int sv, int incmax, double **vert, int **vinc, bool report)
	Saves tessellation diagram to gnuplot file. More...
void	saveDescriptors (string filename, double por, double fs, bool report)
	Saves morphology descriptors (porosity and strut content) to a file. More...
void	saveParameters (string filename, double dedge, bool report)
	Saves parameters (dedge) to a file. More...

Detailed Description

Functions for input and output operations.

Author

Pavel Ferkl

Definition in file inout.cc.

Function Documentation

allocateFromVTK()

int*** allocateFromVTK	(	string	filename,
		int ***	amat,
		bool	report
	)

Allocates the matrix from dimensions read from VTK file.

Parameters

[in]	filename	Name of input VTK file with morphology
[in,out]	amat	matrix
[in]	report	show output

Definition at line 71 of file inout.cc.

References alloc_3Dmatrix(), globals::nx, globals::ny, and constants::nz.

Referenced by main().

importFromVTK()

void importFromVTK	(	string	filename,
		int ***	amat,
		bool	report
	)

Reads morphology from VTK file. Changes amat.

Parameters

[in]	filename	Name of input VTK file with morphology
[in,out]	amat	matrix
[in]	report	show output

Definition at line 108 of file inout.cc.

Referenced by main().

readParameters()

void readParameters	(	string	filename,
		string &	outputFilename,
		string &	VTKInputFilename,
		string &	GnuplotSkeletonFilename,
		string &	GnuplotAltSkeletonFilename,
		string &	descriptorsFilename,
		string &	parametersFilename
	)

Reads file with options and parameters

Reads parameters from file and stores them to global variables. These parameters determine what will be done.

Parameters

[in]	filename	Name of input file with parameters that determine what will be done
[in,out]	outputFilename	Name of output file with morphology without extension
[in,out]	VTKInputFilename	Name of input VTK file with morphology
[in,out]	GnuplotSkeletonFilename	Name of input/output file with tessellation - gnuplot diagram
[in,out]	GnuplotAltSkeletonFilename	Name of output file with tessellation - alt. gnuplot diagram
[in,out]	descriptorsFilename	Name of output file with morphology descriptors
[in,out]	parametersFilename	Name of output file with parameters

Definition at line 18 of file inout.cc.

References globals::createEdges, globals::createNodes, globals::dedge, constants::dstrut, globals::grid, globals::import_vtk, globals::nx, globals::ny, constants::nz, globals::openCell, globals::progress_report, globals::RANDOM, globals::save_dat, globals::save_voro_diag1, globals::save_voro_diag2, globals::save_vtk, globals::strutPorosity, globals::sx, globals::sy, and globals::sz.

Referenced by main().

saveDescriptors()

void saveDescriptors	(	string	filename,
		double	por,
		double	fs,
		bool	report
	)

Saves morphology descriptors (porosity and strut content) to a file.

Parameters

[in]	filename	Output file with morphology descriptors
[in]	por	porosity
[in]	fs	strut content
[in]	report	show output

Definition at line 295 of file inout.cc.

Referenced by main().

saveParameters()

void saveParameters	(	string	filename,
		double	dedge,
		bool	report
	)

Saves parameters (dedge) to a file.

Parameters

[in]	filename	Name of output file with parameters
[in]	dedge	edge strut size parameter
[in]	report	show output

Definition at line 315 of file inout.cc.

Referenced by main().

saveToDX()

void saveToDX	(	const char *	filename,
		int ***	amat,
		bool	report
	)

Saves morphology to DX file.

Parameters

[in]	filename	Name of output file with morphology
[in]	amat	matrix
[in]	report	show output

Definition at line 220 of file inout.cc.

References globals::nx, globals::ny, and constants::nz.

Referenced by main().

saveToGnuplot()

void saveToGnuplot	(	string	filename,
		int	sv,
		int	incmax,
		double **	vert,
		int **	vinc,
		bool	report
	)

Saves tessellation diagram to gnuplot file.

Parameters

[in]	filename	Name of output file with tessellation
[in]	sv	number of vertices
[in]	incmax	maximum number of connections to one vertex
[in]	vert	vertex positions
[in]	vinc	indexes of connected vertices
[in]	report	show output

Definition at line 256 of file inout.cc.

References in_domain().

Referenced by main().

saveToVTK()

void saveToVTK	(	const char *	filename,
		int ***	amat,
		bool	report
	)

Saves morphology to VTK file.

Parameters

[in]	filename	Name of output file with morphology
[in]	amat	matrix
[in]	report	show output

Definition at line 178 of file inout.cc.

References globals::nx, globals::ny, and constants::nz.

Referenced by main().